作者：向立刚,汪汉成,郭珍妮,谢红炼,蔡刘体,余知和
单位：<sup class=\mag-xml-aff-label-sup added-by-sys\>1.</sup> 长江大学生命科学学院 湖北 荆州 434025,<sup class=\mag-xml-aff-label-sup added-by-sys\>2.</sup> 贵州省烟草科学研究院 贵州 贵阳 550081
关键词：寄生疫霉烟草变种,Illumina高通量测序,真菌多样性,转录间隔区
基金：中国博士后科学基金(2017M610585),贵州省科技厅优秀青年人才培养计划（黔科合平台人才）([2017] 5619),贵州省公司科技项目(2017014),贵州省公司科技项目(2019014),国家自然科学基金(31570022)
烟草黑胫病是由寄生疫霉烟草变种引起的一种对烟草生产造成巨大经济损失的土传病害。本文以健康烟株与感染黑胫病烟株茎秆和根际土壤为研究对象,通过PCR技术扩增样本中真菌转录间隔区的ITS1区域,采用Illumina Miseq高通量测序技术对扩增片段进行测序,旨在了解黑胫病感染对于烟草茎秆和根际土壤真菌群落结构与多样性的影响。本研究20个测序样品,共获得755 599条高质量序列片段,最短序列为200bp,最长序列为356bp,平均序列长度248bp。结果表明,健康烟株和发病烟株根际土壤的优势真菌为子囊菌门Ascomycota、接合菌门Zygomycota和担子菌门Basidiomycota,所有茎秆样品的优势真菌为子囊菌门、担子菌门。健康烟株与感染黑胫病烟株根际土壤样品相对丰度大于1%的属有镰刀菌属Fusarium、被孢霉属Mortierella、隐球菌属Cryptococcus、链格孢属Alternaria和赤霉菌属Gibberella等,其中,健康烟株根际土壤优势属为镰刀菌属（39.35%）和被孢霉属（14.19%）,发病烟株根际土壤镰刀菌属和被孢霉属相对丰度分别为40.26%和20.77%;健康茎秆样品优势属为隐球菌属（31.12%）、链格孢属（18.28%）、镰刀菌属（15.67%）和红酵母属Rhodotorula（13.34%）;病健交界茎秆样品优势属为镰刀菌属（41.36%）、隐球菌属（28.15%）和链格孢属（22.32%）;发病茎秆优势属为隐球菌属（62.14%）和链格孢属（27.75%）。烟株感染黑胫病后,其根际土壤与茎秆样品真菌优势属种类与健康烟株无明显变化,但属水平的相对丰度变化显著。发病烟株茎秆与根际土壤样品真菌群落Sobs、Chao1、Shannon指数较健康烟株降低,Simpson指数上升,表明烟株发病后根际土壤真菌与茎秆内生真菌群落丰富度与多样性降低。该结果对于研究烟草黑胫病发生的微生态机制及其生物防治具有一定的理论指导意义。"/>template{display:none;}.mag-rich-xref-fn { cursor: pointer;}//长视频$(document).ready(function(){if($("#showLongArticleVideo") && $("#showLongArticleVideo").length && $("#showLongArticleVideo").length>0){mag_ajax_update({ele_id:'showLongArticleVideo',url:mag_currentQikanUrl() + "/CN/article/showLongArticleVideo.do?id="+$("#articleId").val()});}});//可视化图谱$(document).ready(function(){if($("#showArticle_knowledgeMap") && $("#showArticle_knowledgeMap").length && $("#showArticle_knowledgeMap").length>0){jQuery.getJSON("/Jwxb/CN/lexeme/existsCnctstInArticle.do?articleID="+$("#articleId").val(), null, function(json){if(json.result){$("#showArticle_knowledgeMap").show();}});}});$(document).ready(function(){var metaDataStr = $.trim($("#article_metaJson").val());if(metaDataStr!=''){eval("window.metaData="+metaDataStr);}if(window.metaData && (!window.metaData.authorNotesCommon_cn && !window.metaData.authorNotesCorresp_cn && window.metaData.authorNotes_cn)){window.metaData.authorNotesCommon_cn = window.metaData.authorNotes_cn;}if(window.metaData && (!window.metaData.authorNotesCommon_en && !window.metaData.authorNotesCorresp_en && window.metaData.authorNotes_en)){window.metaData.authorNotesCommon_en = window.metaData.authorNotes_en;}var _nlmdtdXml = $("#article_nlmdtdXml").val();var magDir = _nlmdtdXml.replace(/\/[^\/]+$/,'');window.metaData.magDir = magDir;new mag_vue({ el: '#metaVue', //dataUrl: mag_currentQikanUrl() + '/EN/article/getRichHtmlJson.do?articleId='+$("#articleId").val(), data:window.metaData, loading:true, doTextFun:function(text){ return doDataJsonText(text); 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来源：2019年第12期
《菌物学报》期刊编辑部
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